Transcript: lnc-FGGY-6:6

Basic information

LNCipedia transcript ID: lnc-FGGY-6:6 
LNCipedia gene ID: lnc-FGGY-6
Ensembl Gene ID: ENSG00000283445
Ensembl Transcript ID: ENST00000636386
Location (hg38): chr1:58718420-58771295
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2708 bp
Exons: 4
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000636386.1
Alternative gene names: ENSG00000283445.1; RP11-63G10.4; AL136985.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.8032 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGGY-6:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FGGY-6:6
5.0 lnc-FGGY-6:6
5.1 lnc-USP1-33:5
5.2 lnc-FGGY-6:6