Transcript: lnc-FGFR2-2:5

Basic information

LNCipedia transcript ID: lnc-FGFR2-2:5 
LNCipedia gene ID: lnc-FGFR2-2
Location (hg38): chr10:121038958-121077472
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 348 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000001057.1|MICT00000049676.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.4586 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FGFR2-2:5
5.0 lnc-FGFR2-2:5
5.1 lnc-NSMCE4A-22:5
5.2 lnc-FGFR2-2:5