Transcript: lnc-FGFR2-10:2

Basic information

LNCipedia transcript ID: lnc-FGFR2-10:2 
LNCipedia gene ID: lnc-FGFR2-10
Location (hg38): chr10:120766764-120781861
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 950 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_392_chr10:122526275-122541373_whiteBloodCell
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.6567 non-coding 
CPAT coding probability 13.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR2-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGFR2-10:2
4.0 lnc-FGFR2-10:2
4.1 lnc-FGFR2-10:2
5.0 lnc-FGFR2-10:2
5.1 lnc-NSMCE4A-32:2
5.2 lnc-FGFR2-10:2