Transcript: lnc-FGFR1OP-6:1

Basic information

LNCipedia transcript ID: lnc-FGFR1OP-6:1 
LNCipedia gene ID: lnc-FGFR1OP-6
Location (hg38): chr6:166097720-166099637
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1815 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000541163; NONHSAT116030
Alternative gene names: ENSG00000204517; AL627443.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.7036 non-coding 
CPAT coding probability 2.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FGFR1OP-5:1
3.1 lnc-FGFR1OP-6:1
4.0 lnc-FGFR1OP-6:1
4.1 lnc-FGFR1OP-6:1
5.0 lnc-FGFR1OP-6:1
5.1 lnc-SYTL3-65:3
5.2 lnc-FGFR1OP-6:1