Transcript: lnc-FGFR1OP-4:7

Basic information

LNCipedia transcript ID: lnc-FGFR1OP-4:7 
LNCipedia gene ID: lnc-FGFR1OP-4
Location (hg38): chr6:167094259-167096712
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2454 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272980.1|ENCT00000380391.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.5698 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGFR1OP-4:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCR6-4:1
5.0 lnc-CCR6-4:1
5.1 lnc-SYTL3-76:1
5.2 lnc-FGFR1OP-4:7