Transcript: lnc-FGFR1OP-18:1

Basic information

LNCipedia transcript ID: lnc-FGFR1OP-18:1 
LNCipedia gene ID: lnc-FGFR1OP-18
Location (hg38): chr6:166342542-166343129
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 588 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT116042
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.4052 non-coding 
CPAT coding probability 47.21% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FGFR1OP-18:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGFR1OP-3:2
4.0 lnc-FGFR1OP-18:1
4.1 lnc-FGFR1OP-18:1
5.0 lnc-FGFR1OP-18:1
5.1 lnc-SYTL3-69:1
5.2 lnc-FGFR1OP-18:1