Transcript: lnc-FGF9-3:18

Basic information

LNCipedia transcript ID: lnc-FGF9-3:18 
LNCipedia gene ID: lnc-FGF9-3
Location (hg38): chr13:22061694-22281506
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7286 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000013953.1|ENCT00000110678.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -72.9113 non-coding 
CPAT coding probability 4.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF9-3:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FGF9-3:18
5.0 lnc-FGF9-3:18
5.1 lnc-GTF3A-103:12
5.2 lnc-FGF9-3:18