Transcript: lnc-FEZ2-7:11

Basic information

LNCipedia transcript ID: lnc-FEZ2-7:11 
LNCipedia gene ID: lnc-FEZ2-7
Ensembl Gene ID: ENSG00000260025
Ensembl Transcript ID: ENST00000565283
Location (hg38): chr2:36354749-36355114
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 366 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565283.1; RP11-490M8.1-001; OTTHUMT00000431085.1; NONHSAT070078
Alternative gene names: ENSG00000260025.1; RP11-490M8.1; OTTHUMG00000175796.1; AC009414.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -380.1587 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FEZ2-7:11 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007401.2.1-1:3
4.0 lnc-AC007401.2.1-1:3
4.1 lnc-AC007401.2.1-1:3
5.0 lnc-AC007401.2.1-1:3
5.1 lnc-MAP4K3-67:11
5.2 lnc-FEZ2-7:11