Transcript: lnc-FBXW7-5:1

Basic information

LNCipedia transcript ID: lnc-FBXW7-5:1 
LNCipedia gene ID: lnc-FBXW7-5
Location (hg38): chr4:152320544-152321044
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 501 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017
Alternative transcript names: NONHSAT098798; ENST00000603766.1
Alternative gene names: ENSG00000270750.1; RP11-461L13.3; AC080078.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.2342 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXW7-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXW7-5:1
4.0 lnc-FBXW7-5:1
4.1 lnc-FBXW7-5:1
5.0 lnc-FBXW7-5:1
5.1 lnc-TMEM154-6:1
5.2 lnc-FBXW7-5:1