Transcript: lnc-FBXO21-1:2

Basic information

LNCipedia transcript ID: lnc-FBXO21-1:2 
LNCipedia gene ID: lnc-FBXO21-1
Location (hg38): chr12:117242768-117246076
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 843 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_734_chr12:117680572-117683881_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 177.3204 coding 
CPAT coding probability 11.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FBXO21-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXO21-1:2
4.0 lnc-FBXO21-1:2
4.1 lnc-FBXO21-1:2
5.0 lnc-FBXO21-1:2
5.1 lnc-FBXO21-1:2
5.2 lnc-FBXO21-1:2