Transcript: lnc-FBXL14-3:1

Basic information

LNCipedia transcript ID: lnc-FBXL14-3:1 
LNCipedia gene ID: lnc-FBXL14-3
Ensembl Gene ID: ENSG00000249028
Ensembl Transcript ID: ENST00000513082
Location (hg38): chr12:1380060-1391502
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2088 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000513082.2; RP5-951N9.1-001; OTTHUMT00000398455.1; NONHSAT025388
Alternative gene names: ENSG00000249028.2; RP5-951N9.1; OTTHUMG00000168150.1; AC004672.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.1316 non-coding 
CPAT coding probability 5.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBXL14-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBXL14-3:1
4.0 lnc-FBXL14-3:1
4.1 lnc-FBXL14-3:1
5.0 lnc-FBXL14-3:1
5.1 lnc-CHD4-112:2
5.2 lnc-FBXL14-3:1