Transcript: lnc-FBN2-6:2

Basic information

LNCipedia transcript ID: lnc-FBN2-6:2 
LNCipedia gene ID: lnc-FBN2-6
Ensembl Gene ID: ENSG00000251680
Ensembl Transcript ID: ENST00000515569
Location (hg38): chr5:129762493-129905661
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 462 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000515569.1; CTC-575N7.1-002; OTTHUMT00000371452.1; NONHSAT103670
Alternative gene names: ENSG00000251680.1; CTC-575N7.1; OTTHUMG00000163042.1; ENSG00000251680.5; AC008591.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.2631 non-coding 
CPAT coding probability 4.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBN2-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FBN2-6:2
4.0 lnc-FBN2-6:2
4.1 lnc-FBN2-6:2
5.0 lnc-FBN2-6:2
5.1 lnc-TIFAB-94:2
5.2 lnc-FBN2-6:2