Transcript: lnc-FBLL1-4:6

Basic information

LNCipedia transcript ID: lnc-FBLL1-4:6 
LNCipedia gene ID: lnc-FBLL1-4
Ensembl Gene ID: ENSG00000248222
Ensembl Transcript ID: ENST00000511447
Location (hg38): chr5:169013248-169036470
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 573 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000511447.1; CTB-174D11.1-009; OTTHUMT00000371515.1; NONHSAT105012; ENST00000511447.5
Alternative gene names: ENSG00000248222.1; CTB-174D11.1; OTTHUMG00000163054.3; ENSG00000248222.5; AC011389.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -455.5362 non-coding 
CPAT coding probability 31.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FBLL1-4:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RARS-4:3
4.0 lnc-RARS-4:3
4.1 lnc-RARS-4:3
5.0 lnc-RARS-4:3
5.1 lnc-ATP6V0E1-113:6
5.2 lnc-FBLL1-4:6