Transcript: lnc-FASLG-2:2

Basic information

LNCipedia transcript ID: lnc-FASLG-2:2 
LNCipedia gene ID: lnc-FASLG-2
Ensembl Gene ID: ENSG00000224228
Ensembl Transcript ID: ENST00000432694
Location (hg38): chr1:172775905-173064015
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 808 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000432694.2
Alternative gene names: ENSG00000224228.2; RP1-15D23.2; AL031599.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.0365 non-coding 
CPAT coding probability 11.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FASLG-2:2 no no no no

Available literature

  1. Xia (2014), Long noncoding RNA associated-competing endogenous RNAs in gastric cancer., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FASLG-2:2
4.0 lnc-FASLG-2:2
4.1 lnc-FASLG-2:2
5.0 lnc-FASLG-2:2
5.1 lnc-MAEL-99:2
5.2 lnc-FASLG-2:2