Transcript: lnc-FARP1-8:1

Basic information

LNCipedia transcript ID: lnc-FARP1-8:1 
LNCipedia gene ID: lnc-FARP1-8
Location (hg38): chr13:98681194-98683576
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 245 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT034892; FPKM1_group_8332_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -46.5628 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FARP1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FARP1-8:1
4.0 lnc-FARP1-8:1
4.1 lnc-FARP1-8:1
5.0 lnc-FARP1-8:1
5.1 lnc-COL4A2-99:1
5.2 lnc-FARP1-8:1