Transcript: lnc-FANCD2OS-2:2

Basic information

LNCipedia transcript ID: lnc-FANCD2OS-2:2 
LNCipedia gene ID: lnc-FANCD2OS-2
Location (hg38): chr3:10057973-10058287
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 315 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT087877
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.4407 non-coding 
CPAT coding probability 68.09% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FANCD2OS-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf24-2:1
4.0 lnc-C3orf24-2:1
4.1 lnc-C3orf24-2:1
5.0 lnc-C3orf24-2:1
5.1 lnc-FANCD2OS-2:1
5.2 lnc-FANCD2OS-2:2