Transcript: lnc-FAM9C-6:1

Basic information

LNCipedia transcript ID: lnc-FAM9C-6:1 
LNCipedia gene ID: lnc-FAM9C-6
Location (hg38): chrX:12812739-12853221
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1588 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_3630_NR_030727
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.4414 non-coding 
CPAT coding probability 4.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM9C-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM9C-6:1
4.0 lnc-FAM9C-6:1
4.1 lnc-FAM9C-6:1
5.0 lnc-FAM9C-6:1
5.1 lnc-PCSK1N-211:1
5.2 lnc-FAM9C-6:1