Transcript: lnc-FAM86B2-58:4

Basic information

LNCipedia transcript ID: lnc-FAM86B2-58:4 
LNCipedia gene ID: lnc-FAM86B2-58
Ensembl Gene ID: ENSG00000283674
Ensembl Transcript ID: ENST00000635775
Location (hg38): chr8:12537079-12665588
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3959 bp
Exons: 9
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500162; ENST00000635775.1
Alternative gene names: ENSG00000247397; AC068587.3; ENSG00000283674.1; RP11-419I17.1; ENSG00000283674.2; AC068587.6; AC068587.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.0433 coding 
CPAT coding probability 95.68% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM86B2-58:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LONRF1-2:2
3.1 lnc-LONRF1-2:2
4.0 lnc-LONRF1-2:2
4.1 lnc-LONRF1-2:2
5.0 lnc-LONRF1-2:2
5.1 lnc-PINX1-58:4
5.2 lnc-FAM86B2-58:4