Transcript: lnc-FAM84B-15:106
Basic information
LNCipedia transcript ID: lnc-FAM84B-15:106
HGNC Gene Symbol: lnc-FAM84B-15
HGNC Full Gene Name:
cancer susceptibility 19
Ensembl Gene ID:
ENSG00000254166
Ensembl Transcript ID:
ENST00000641794
Location (hg38): chr8:127078439-127082282
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 857 bp
Exons: 2
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000641794.1
Alternative gene names: ENSG00000254166.2; CASC19
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Locus conservation? | ![]() |
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lnc-FAM84B-15:106 | no | no | no | no |
Available literature
- Li (2016), Cancer RNA-Seq Nexus: a database of phenotype-specific transcriptome profiling in cancer cells., Nucleic Acids Res.
- Xie (2016), Long non-coding RNAs in colorectal cancer., Oncotarget
- Al-Tassan (2015), A new GWAS and meta-analysis with 1000Genomes imputation identifies novel risk variants for colorectal cancer., Sci Rep
- Cabanski (2015), Pan-cancer transcriptome analysis reveals long noncoding RNAs with conserved function., RNA Biol
- Deng (2015), Long noncoding RNA CCAT1 promotes hepatocellular carcinoma progression by functioning as let-7 sponge., J. Exp. Clin. Cancer Res.
- Hu (2015), Downregulation of NUF2 inhibits tumor growth and induces apoptosis by regulating lncRNA AF339813., Int J Clin Exp Pathol
- Kim (2015), MYC-repressed long noncoding RNAs antagonize MYC-induced cell proliferation and cell cycle progression., Oncotarget
- Ma (2015), Genetic variant in 8q24 is associated with prognosis for gastric cancer in a Chinese population., J. Gastroenterol. Hepatol.
- Ma (2015), Long non-coding RNA CCAT1 promotes gallbladder cancer development via negative modulation of miRNA-218-5p., Cell Death Dis
- Mizrahi (2015), Colon Cancer Associated Transcript-1 (CCAT1) Expression in Adenocarcinoma of the Stomach., J Cancer
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
5.0 | lnc-FAM84B-15:106 |
5.1 | lnc-FAM84B-15:106 |
5.2 | lnc-FAM84B-15:106 |