Transcript: lnc-FAM83G-5:1

Basic information

LNCipedia transcript ID: lnc-FAM83G-5:1 
LNCipedia gene ID: lnc-FAM83G-5
Location (hg38): chr17:18852718-18856170
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3453 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033171.1|ENCT00000181579.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.0483 non-coding 
CPAT coding probability 6.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM83G-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM83G-5:1
5.0 lnc-FAM83G-5:1
5.1 lnc-B9D1-25:2
5.2 lnc-FAM83G-5:1