Transcript: lnc-FAM53A-1:7

Basic information

LNCipedia transcript ID: lnc-FAM53A-1:7 
LNCipedia gene ID: lnc-FAM53A-1
Location (hg38): chr4:1574013-1580470
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 845 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000244459.2|HBMT00001079188.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.218 non-coding 
CPAT coding probability 27.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM53A-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM53A-1:7
5.0 lnc-FAM53A-1:7
5.1 lnc-PSAPL1-78:4
5.2 lnc-FAM53A-1:7