Transcript: lnc-FAM236B-4:4

Basic information

LNCipedia transcript ID: lnc-FAM236B-4:4 
LNCipedia gene ID: lnc-FAM236B-4
Location (hg38): chrX:72781883-72782594
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 381 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015
Alternative transcript names: ENST00000596535.2
Alternative gene names: ENSG00000268994.2; RP1-172N19.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -130.3606 non-coding 
CPAT coding probability 7.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM236B-4:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-PHKA1-4:4
4.1 lnc-PHKA1-4:4
5.0 lnc-PHKA1-4:4
5.1 lnc-PHKA1-4:4
5.2 lnc-FAM236B-4:4