Transcript: lnc-FAM174B-3:2

Basic information

LNCipedia transcript ID: lnc-FAM174B-3:2 
LNCipedia gene ID: lnc-FAM174B-3
Location (hg38): chr15:92470239-92471575
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 488 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00023786
Alternative gene names: XLOC_011583; linc-VPS33B-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.922 non-coding 
CPAT coding probability 10.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM174B-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM174B-3:1
3.1 lnc-FAM174B-3:2
4.0 lnc-FAM174B-3:2
4.1 lnc-FAM174B-3:2
5.0 lnc-FAM174B-3:2
5.1 lnc-CIB1-29:1
5.2 lnc-FAM174B-3:2