Transcript: lnc-FAM168A-2:1

Basic information

LNCipedia transcript ID: lnc-FAM168A-2:1 
LNCipedia gene ID: lnc-FAM168A-2
Ensembl Gene ID: ENSG00000257038
Ensembl Transcript ID: ENST00000546324
Location (hg38): chr11:73307235-73309361
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1695 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000546324.1; RP11-800A3.7-001; OTTHUMT00000397364.2; NONHSAT022820
Alternative gene names: ENSG00000257038.1; RP11-800A3.7; OTTHUMG00000167970.2; AP002761.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -416.5358 non-coding 
CPAT coding probability 100.00% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM168A-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM168A-2:1
4.0 lnc-FAM168A-2:1
4.1 lnc-FAM168A-2:1
5.0 lnc-FAM168A-2:1
5.1 lnc-UCP3-26:1
5.2 lnc-FAM168A-2:1