Transcript: lnc-FAM162A-2:17

Basic information

LNCipedia transcript ID: lnc-FAM162A-2:17 
LNCipedia gene ID: lnc-FAM162A-2
Location (hg38): chr3:122416206-122443180
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 554 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272758.1|ENST00000609469.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.3335 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM162A-2:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM162A-2:17
5.0 lnc-FAM162A-2:17
5.1 lnc-DTX3L-5:11
5.2 lnc-FAM162A-2:17