Transcript: lnc-FAM161A-4:1

Basic information

LNCipedia transcript ID: lnc-FAM161A-4:1 
LNCipedia gene ID: lnc-FAM161A-4
Location (hg38): chr2:61693220-61694697
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1478 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048676.1|ENCT00000242744.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -30.6011 non-coding 
CPAT coding probability 4.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM161A-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM161A-4:1
5.0 lnc-FAM161A-4:1
5.1 lnc-PPP4R3B-98:1
5.2 lnc-FAM161A-4:1