Transcript: lnc-FAM153B-6:1

Basic information

LNCipedia transcript ID: lnc-FAM153B-6:1 
LNCipedia gene ID: lnc-FAM153B-6
Location (hg38): chr5:175972601-175987361
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 377 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010185; NONHSAT105282
Alternative gene names: XLOC_004653; linc-FAM153B


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -60.3304 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM153B-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM153B-2:1
3.1 lnc-FAM153B-3:1
4.0 lnc-FAM153B-3:1
4.1 lnc-FAM153B-3:1
5.0 lnc-FAM153B-3:1
5.1 lnc-ATP6V0E1-95:1
5.2 lnc-FAM153B-6:1