Transcript: lnc-FAM120B-6:1

Basic information

LNCipedia transcript ID: lnc-FAM120B-6:1 
LNCipedia gene ID: lnc-FAM120B-6
Location (hg38): chr6:170138998-170140753
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 607 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012632; NONHSAT116248
Alternative gene names: XLOC_005560; linc-FAM120B-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 47.6482 non-coding 
CPAT coding probability 25.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM120B-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM120B-4:1
3.1 lnc-FAM120B-6:1
4.0 lnc-FAM120B-6:1
4.1 lnc-FAM120B-6:1
5.0 lnc-FAM120B-6:1
5.1 lnc-SYTL3-128:2
5.2 lnc-FAM120B-6:1