Transcript: lnc-FAM102B-3:4

Basic information

LNCipedia transcript ID: lnc-FAM102B-3:4 
LNCipedia gene ID: lnc-FAM102B-3
Location (hg38): chr1:108660961-108668944
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7984 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000011913.1|ENCT00000009525.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 77.4024 coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FAM102B-3:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM102B-3:4
5.0 lnc-FAM102B-3:4
5.1 lnc-GSTM5-29:2
5.2 lnc-FAM102B-3:4