Transcript: lnc-F7-7:1

Basic information

LNCipedia transcript ID: lnc-F7-7:1 
LNCipedia gene ID: lnc-F7-7
Ensembl Gene ID: ENSG00000269376
Ensembl Transcript ID: ENST00000598534
Location (hg38): chr13:113009671-113010319
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 649 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT035309; ENST00000598534.1
Alternative gene names: ENSG00000269376.1; RP11-120K24.5; AL356740.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.0992 non-coding 
CPAT coding probability 52.03% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-F7-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F7-7:1
4.0 lnc-F7-7:1
4.1 lnc-F7-7:1
5.0 lnc-F7-7:1
5.1 lnc-TMCO3-15:1
5.2 lnc-F7-7:1