Transcript: lnc-F3-3:1

Basic information

LNCipedia transcript ID: lnc-F3-3:1 
LNCipedia gene ID: lnc-F3-3
Location (hg38): chr1:94452020-94592677
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 605 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_89_chr1:94917575-94970548_76bGuttman_hLF
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.7511 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F3-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F3-3:1
4.0 lnc-F3-3:1
4.1 lnc-F3-3:1
5.0 lnc-F3-3:1
5.1 lnc-CNN3-3:9
5.2 lnc-F3-3:1