Transcript: lnc-F2RL2-1:1

Basic information

LNCipedia transcript ID: lnc-F2RL2-1:1 
LNCipedia gene ID: lnc-F2RL2-1
Ensembl Gene ID: ENSG00000249713
Ensembl Transcript ID: ENST00000511327
Location (hg38): chr5:76606608-76608970
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1588 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000511327.1; CTD-2236F14.1-001; OTTHUMT00000368875.1; NONHSAT102241
Alternative gene names: ENSG00000249713.1; CTD-2236F14.1; OTTHUMG00000162430.1; AC026725.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.5216 non-coding 
CPAT coding probability 5.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F2RL2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F2RL2-1:1
4.0 lnc-F2RL2-1:1
4.1 lnc-F2RL2-1:1
5.0 lnc-F2RL2-1:1
5.1 lnc-ANKRD34B-83:3
5.2 lnc-F2RL2-1:1