Transcript: lnc-F11-2:17

Basic information

LNCipedia transcript ID: lnc-F11-2:17 
LNCipedia gene ID: lnc-F11-2
Location (hg38): chr4:187059194-187059702
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 382 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008368; NONHSAT099681
Alternative gene names: XLOC_003823; linc-ZFP42-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -200.6137 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-F11-2:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-F11-3:1
3.1 lnc-F11-3:1
4.0 lnc-F11-3:1
4.1 lnc-F11-2:17
5.0 lnc-F11-2:17
5.1 lnc-F11-12:16
5.2 lnc-F11-2:17