Transcript: lnc-EYA4-4:1

Basic information

LNCipedia transcript ID: lnc-EYA4-4:1 
LNCipedia gene ID: lnc-EYA4-4
Location (hg38): chr6:133129773-133148273
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1216 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3260_NR_026969
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 42.5902 non-coding 
CPAT coding probability 2.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EYA4-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EYA4-4:1
4.0 lnc-EYA4-4:1
4.1 lnc-EYA4-4:1
5.0 lnc-EYA4-4:1
5.1 lnc-TBPL1-13:1
5.2 lnc-EYA4-4:1