Transcript: lnc-ETS2-6:1

Basic information

LNCipedia transcript ID: lnc-ETS2-6:1 
LNCipedia gene ID: lnc-ETS2-6
Location (hg38): chr21:38649628-38652553
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1542 bp
Exons: 3
Sources: NONCODE v4; Nielsen et al.,2014
Alternative transcript names: NONHSAT082114; ucscGeneNc_uc002yyn_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.2827 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ETS2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ETS2-6:1
4.0 lnc-ETS2-6:1
4.1 lnc-ETS2-6:1
5.0 lnc-ETS2-6:1
5.1 lnc-SIM2-53:1
5.2 lnc-ETS2-6:1