Transcript: lnc-ESM1-4:5

Basic information

LNCipedia transcript ID: lnc-ESM1-4:5 
LNCipedia gene ID: lnc-ESM1-4
Location (hg38): chr5:54666059-54703324
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 275 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000079799.1|FTMT21700014468.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -158.641 non-coding 
CPAT coding probability 12.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ESM1-4:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-45H22.3.1-1:9
5.0 lnc-RP11-45H22.3.1-1:9
5.1 lnc-ACTBL2-40:5
5.2 lnc-ESM1-4:5