Transcript: lnc-ERLIN2-1:2

Basic information

LNCipedia transcript ID: lnc-ERLIN2-1:2 
LNCipedia gene ID: lnc-ERLIN2-1
RefSeq ID: NR_125820
Location (hg38): chr8:37717579-37733493
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 965 bp
Exons: 3
Sources: Broad Institute; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00014488; NR_125820; NR_125820.1
Alternative gene names: XLOC_006775; linc-ERLIN2; LOC101929622


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.3603 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERLIN2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERLIN2-1:2
3.1 lnc-ERLIN2-1:2
4.0 lnc-ERLIN2-1:2
4.1 lnc-ERLIN2-1:2
5.0 lnc-ERLIN2-1:2
5.1 lnc-KCNU1-9:2
5.2 lnc-ERLIN2-1:2