Transcript: lnc-ERICH1-5:1

Basic information

LNCipedia transcript ID: lnc-ERICH1-5:1 
LNCipedia gene ID: lnc-ERICH1-5
Location (hg38): chr8:1428297-1429911
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1408 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014902; NONHSAT124666
Alternative gene names: XLOC_006973; linc-ERICH1-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.2257 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERICH1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ERICH1-4:1
3.1 lnc-ERICH1-5:1
4.0 lnc-ERICH1-5:1
4.1 lnc-ERICH1-5:1
5.0 lnc-ERICH1-5:1
5.1 lnc-DEFA1B-76:1
5.2 lnc-ERICH1-5:1