Transcript: lnc-ERI1-32:22

Basic information

LNCipedia transcript ID: lnc-ERI1-32:22 
LNCipedia gene ID: lnc-ERI1-32
Location (hg38): chr8:9189188-9194207
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 554 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_3542_chr8:9046697-9051717_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.056 non-coding 
CPAT coding probability 0.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERI1-32:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-10A14.4.1-2:10
4.0 lnc-RP11-10A14.4.1-8:9
4.1 lnc-RP11-10A14.4.1-8:9
5.0 lnc-RP11-10A14.4.1-8:9
5.1 lnc-DEFB106A-32:22
5.2 lnc-ERI1-32:22