Transcript: lnc-ERI1-32:11

Basic information

LNCipedia transcript ID: lnc-ERI1-32:11 
LNCipedia gene ID: lnc-ERI1-32
Location (hg38): chr8:9188999-9193878
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1057 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000248538.2|FTMT23100028013.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 19.056 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERI1-32:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-10A14.4.1-8:19
5.0 lnc-RP11-10A14.4.1-8:19
5.1 lnc-DEFB106A-32:11
5.2 lnc-ERI1-32:11