Transcript: lnc-EQTN-1:3

Basic information

LNCipedia transcript ID: lnc-EQTN-1:3 
LNCipedia gene ID: lnc-EQTN-1
Location (hg38): chr9:27235686-27272793
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2911 bp
Exons: 17
Sources: Nielsen et al.,2014
Alternative transcript names: l_3745_NR_026687
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.3199 non-coding 
CPAT coding probability 17.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EQTN-1:3 no no no no

Available literature

  1. Li (2015), Construction and analysis of lncRNA-lncRNA synergistic networks to reveal clinically relevant lncRNAs in cancer., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf11-1:2
4.0 LINC00032:3
4.1 LINC00032:3
5.0 LINC00032:3
5.1 lnc-CD72-101:3
5.2 lnc-EQTN-1:3