Transcript: lnc-EPB41L2-1:1

Basic information

LNCipedia transcript ID: lnc-EPB41L2-1:1 
LNCipedia gene ID: lnc-EPB41L2-1
Location (hg38): chr6:131126567-131171535
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 328 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3256_chr6:131447706-131492675_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.8889 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EPB41L2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EPB41L2-1:1
4.0 lnc-EPB41L2-1:1
4.1 lnc-EPB41L2-1:1
5.0 lnc-EPB41L2-1:1
5.1 lnc-HDDC2-59:1
5.2 lnc-EPB41L2-1:1