Transcript: lnc-ENGASE-4:1

Basic information

LNCipedia transcript ID: lnc-ENGASE-4:1 
LNCipedia gene ID: lnc-ENGASE-4
Location (hg38): chr17:79218520-79220526
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1896 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002kav_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.2425 non-coding 
CPAT coding probability 22.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ENGASE-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ENGASE-2:1
4.0 lnc-ENGASE-2:1
4.1 lnc-ENGASE-2:1
5.0 lnc-ENGASE-2:1
5.1 lnc-TSPAN10-119:1
5.2 lnc-ENGASE-4:1