Transcript: lnc-ENDOV-3:1

Basic information

LNCipedia transcript ID: lnc-ENDOV-3:1 
LNCipedia gene ID: lnc-ENDOV-3
Location (hg38): chr17:80673551-80675059
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1239 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_1501_chr17:78647350-78648859_breast
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.3065 non-coding 
CPAT coding probability 2.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ENDOV-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ENDOV-3:1
4.0 lnc-ENDOV-3:1
4.1 lnc-ENDOV-3:1
5.0 lnc-ENDOV-3:1
5.1 lnc-TSPAN10-74:1
5.2 lnc-ENDOV-3:1