Transcript: lnc-EN1-2:3

Basic information

LNCipedia transcript ID: lnc-EN1-2:3 
LNCipedia gene ID: lnc-EN1-2
Location (hg38): chr2:118599785-118602966
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1165 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; NONCODE v4
Alternative transcript names: ENST00000505137; TCONS_00003389; NONHSAT073943
Alternative gene names: ENSG00000248248; XLOC_002292; linc-CCDC93-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.6625 non-coding 
CPAT coding probability 5.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EN1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-19E11.1.1-1:1
3.1 lnc-RP11-19E11.1.1-2:1
4.0 lnc-RP11-19E11.1.1-2:1
4.1 lnc-RP11-19E11.1.1-2:1
5.0 lnc-RP11-19E11.1.1-2:1
5.1 lnc-EN1-2:1
5.2 lnc-EN1-2:3