Transcript: lnc-EMG1-3:1

Basic information

LNCipedia transcript ID: lnc-EMG1-3:1 
LNCipedia gene ID: lnc-EMG1-3
Location (hg38): chr12:7057015-7058338
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 238 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_589_chr12:7164318-7165642_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.2085 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMG1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-U47924.19.1-3:1
4.0 lnc-U47924.19.1-3:1
4.1 lnc-U47924.19.1-3:1
5.0 lnc-U47924.19.1-3:1
5.1 lnc-CLEC4D-28:1
5.2 lnc-EMG1-3:1