Transcript: lnc-EMC8-8:2

Basic information

LNCipedia transcript ID: lnc-EMC8-8:2 
LNCipedia gene ID: lnc-EMC8-8
Ensembl Gene ID: ENSG00000268078
Ensembl Transcript ID: ENST00000600234
Location (hg38): chr16:86158206-86158798
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 479 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000600234.1
Alternative gene names: ENSG00000268078.1; RP11-805I24.4; AC135012.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.3046 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMC8-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC092327.1-4:2
4.0 lnc-AC092327.1-4:2
4.1 lnc-AC092327.1-4:2
5.0 lnc-AC092327.1-4:2
5.1 lnc-MTHFSD-10:2
5.2 lnc-EMC8-8:2