Transcript: lnc-ELOVL5-1:1

Basic information

LNCipedia transcript ID: lnc-ELOVL5-1:1 
LNCipedia gene ID: lnc-ELOVL5-1
Location (hg38): chr6:53382337-53382734
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 356 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: TCONS_00011503; ENST00000457637; ENST00000457637.1; RP11-96J19.3-001; OTTHUMT00000040960.1; NONHSAT113174
Alternative gene names: XLOC_005746; linc-ELOVL5-1; ENSG00000226305; RP11-96J19.3; ENSG00000226305.1; OTTHUMG00000014878.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.2439 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ELOVL5-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ELOVL5-1:1
3.1 lnc-ELOVL5-1:1
4.0 lnc-ELOVL5-1:1
4.1 lnc-ELOVL5-1:1
5.0 lnc-ELOVL5-1:1
5.1 lnc-GSTA5-8:1
5.2 lnc-ELOVL5-1:1