Transcript: lnc-ELMO2-40:2

Basic information

LNCipedia transcript ID: lnc-ELMO2-40:2 
LNCipedia gene ID: lnc-ELMO2-40
Ensembl Gene ID: ENSG00000283757
Ensembl Transcript ID: ENST00000472805
Location (hg38): chr20:46455033-46481357
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3876 bp
Exons: 5
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000472805.2
Alternative gene names: ENSG00000283757.1; AL031686.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 153.9595 coding 
CPAT coding probability 50.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ELMO2-40:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MATN4-40:2
5.1 lnc-MATN4-40:2
5.2 lnc-ELMO2-40:2