Transcript: lnc-EIF2D-3:1

Basic information

LNCipedia transcript ID: lnc-EIF2D-3:1 
LNCipedia gene ID: lnc-EIF2D-3
Ensembl Gene ID: ENSG00000162888
Ensembl Transcript ID: ENST00000367119
Location (hg38): chr1:206491116-206497728
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2096 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000367119.1
Alternative gene names: ENSG00000162888.4; C1orf147


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -184.4619 non-coding 
CPAT coding probability 96.33% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-EIF2D-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C1orf147-3:1
4.1 lnc-C1orf147-3:1
5.0 lnc-C1orf147-3:1
5.1 lnc-NUCKS1-22:1
5.2 lnc-EIF2D-3:1